• National Institute for Computational Sciences is a UT/ORNL Partnership

NICS Current Projects

  1. Effects of entrance geometry on red blood cell motion through pores: Parallel simulations

    Igor Pivkin (Massachusetts Institute of Technology)

    Field of Science: Molecular Biosciences

  2. Campus Champion for RIT

    Gurcharan Khanna (Rochester Institute of Technology)

    Field of Science: Training

  3. Campus Champion for Swarthmore College

    Andrew Ruether (Swarthmore College)

    Field of Science: Training

  4. Insight into biomolecular structure, dynamics, interactions and energetics from simulation

    Thomas Cheatham (University of Utah)

    Field of Science: Cross-Disciplinary Activities

  5. Topics in Computational Cosmology: From Population III Stars to Galaxy Clusters

    Brian OShea (Michigan State University)

    Field of Science: Astronomical Sciences

  6. Campus Champions program for Marquette University

    Xizhou Feng (Marquette University)

    Field of Science: Advanced Scientific Computing

  7. Interaction of aromatic molecules with metal surfaces

    Sampyo Hong (University of Central Florida)

    Field of Science: Chemistry

  8. Ultrascale simulations of blood flow in the intracranial arterial tree

    George Karniadakis (Brown University)

    Field of Science: Chemical, Thermal Systems

  9. Productivity from Open, INtegrated Tools (POINT)

    Raghurama Reddy (Pittsburgh Supercomputing Center)

    Field of Science: Microelectronic Information Processing Systems

  10. Performance Evaluation of NSF SDCI Applications using POINT

    Sameer Shende (University of Oregon)

    Field of Science: Advanced Scientific Computing

  11. Testing of STARCCM+ CFD Software

    Emilian Popov (ORNL)

    Field of Science: Advanced Scientific Computing

  12. CS 594 Spring 2010

    Heike Jagode (Innovative Computing Laboratory, University of Tennessee)

    Field of Science: Computer and Computation Research

  13. Atomistic simulations for plastic deformation in nano-twinned copper

    Huajian Gao (Brown University)

    Field of Science: Mechanical and Structural Systems

  14. All-atom molecular dynamics simulations of small protein folding

    Yong Duan (University of California-Davis)

    Field of Science: Molecular Biosciences

  15. Prediction of Heisenberg exchange coupling constant using DFT+U

    Artem Masunov (University of Central Florida)

    Field of Science: Chemistry

  16. Exploration of downscaling global climate and chemistry models

    Joshua Fu (University of Tennessee, Knoxville)

    Field of Science: Atmospheric Sciences

  17. Calculation of Ultrasound Wave Propagation in Three Dimensions

    Robert Waag (University of Rochester)

    Field of Science: Mathematical Sciences

  18. Development of accurate semiempirical methods for simulating mercury resistance enzymes

    Jerry Parks (Oak Ridge National Laboratory)

    Field of Science: Chemistry

  19. Eddy diffusivities in the Southern Ocean from an eddying model

    Alexa Griesel (Scripps Institution of Oceanography)

    Field of Science: Ocean Sciences

  20. Development and Testing of a CFD Based SPMD Approach for Exploring Active Fin Control in a Knifefish

    Noah Cowan (Johns Hopkins University)

    Field of Science: Integrative Biology and Neuroscience

  21. Chemical Transport in the Multiscale Modeling Framework (MMF): Implications for Convective Mixing and Aerosol Transport

    William Collins (Lawrence Berkeley National Laboratory)

    Field of Science: Atmospheric Sciences

  22. Sequencing DNA using a nanopore

    Aleksei Aksimentiev (University of Illinois at Urbana-Champaign)

    Field of Science: Molecular Biosciences

  23. First Principles Based Modeling of Proton Diffusion in Decorated Carbon Nanotubes as Structurally Defined Systems for Proton Exchange Membranes

    Stephen Paddison (University of Tennessee, Knoxville)

    Field of Science: Chemistry

  24. The oxidation of silicon carbide and structure-defects-mobility relations

    Xiao Shen (Vanderbilt University)

    Field of Science: Materials Research

  25. OSG->TG Gateway

    Neha Sharma (Fermi National Accelerator Laboratory)

    Field of Science: Advanced Scientific Computing

  26. Benchmarking and parallel algorithm improvement for CHARMM with an application to carbohydrate modeling.

    Eric Knoll (National Renewable Energy Laboratory)

    Field of Science: Advanced Scientific Computing

  27. Biomolecular Simulations: Proteins and Bilayers

    Jeffry D. Madura (Duquesne University)

    Field of Science: Chemistry

  28. Mantle Convection and Plate Tectonics Simulations using CitcomS

    Adrian Lenardic (Rice University)

    Field of Science: Earth Sciences

  29. Performance Analysis of OMEN

    Mathieu Luisier (Purdue University)

    Field of Science: Design and Manufacturing Systems

  30. Hurricane Storm Surge Simulations on Petascale Computers

    Clinton N. Dawson (University of Texas at Austin)

    Field of Science: Mathematical Sciences

  31. TeraGrid Campus Champions expanding resources to handle multiple projects/champions

    Michael Bruck (University of Arizona)

    Field of Science: Chemistry

  32. Instability, Turbulence, and Transport in Protoplanetary Disks

    Jeffrey Oishi (Stanford Linear Accelerator Center)

    Field of Science: Astronomical Sciences

  33. SunFlo3DI - Scalable Unstructured Flow Solver

    Resat Payli (Indiana University-Purdue University, Indianapolis)

    Field of Science: Chemical, Thermal Systems

  34. Benchmarking and Testing of AMBER and CHARMM

    Ross Walker (University of California-San Diego)

    Field of Science: Molecular Biosciences

  35. Defects and phase stabilities of complex oxides under extreme conditions

    Jianwei Wang (University of Michigan)

    Field of Science: Materials Research

  36. Highly Parallel Parameter Estimation for Groundwater Flow

    Willem Schreuder (University of Colorado)

    Field of Science: Chemical, Thermal Systems

  37. Scalability Analysis of OMEN, a Multi-Level Parallel Simulator for to Nanoelectronic Devices

    Faisal Saied (Purdue University)

    Field of Science: Electrical and Communication Systems

  38. Campus Champions for OSU

    Dana Brunson (Oklahoma State University)

    Field of Science: Computer and Computation Research

  39. Supplemental allocation for Campus Champion

    Roger Moye (Rice University)

    Field of Science: Information, Robotics, and Intelligent Systems

  40. Campus Champion for University of Kentucky

    Alan Dozier (University of Kentucky)

    Field of Science: Physics

  41. Student Cluster Competition Preparation

    Ricky Kendall (ORNL)

    Field of Science: Chemistry

  42. ICMR summer school

    Francois Gygi (University of California-Davis)

    Field of Science: Molecular Biosciences

  43. Verification of the Goldbach Conjecture

    Tomas Silva (University of Aveiro)

    Field of Science: Mathematical Sciences

  44. Large-scale Parallel Discrete Event Simulation of Communication Networks for CyberSecurity

    David Bauer (MITRE)

    Field of Science: Computer and Computation Research

  45. Molecular Dynamics Simulations of Semistructured Biomolecules

    Michael Colvin (University of California, Merced)

    Field of Science: Molecular Biosciences

  46. Stochastic Models of Fractured Dolomite Aquifers

    Douglas Walker (University of Illinois at Urbana-Champaign)

    Field of Science: Earth Sciences

  47. Computational analysis of Protein Complex Binding

    Lydia Kavraki (Rice University)

    Field of Science: Molecular Biosciences

  48. High-Frequency Simulations of Global Seismic Wave Propagation

    Jeroen Tromp (Princeton University)

    Field of Science: Earth Sciences

  49. Coarse-Grain Models of Virus Assembly

    Stephen Harvey (Georgia Institute of Technology)

    Field of Science: Molecular Biosciences

  50. Campus Champions program for University of Illinois at Urbana-Champaign

    Michael Grady (University of Illinois at Urbana-Champaign)

    Field of Science: Training

  51. Campus Champios program for University of Michigan

    Brock Palen (University of Michigan)

    Field of Science: Training

  52. Campus Champions Program for Purdue University

    Kim Dillman (Purdue University)

    Field of Science: Cross-Disciplinary Activities

  53. Campus Champions program for Auburn University Montgomery

    Luis Cueva-Parra (Auburn University)

    Field of Science: Chemical, Thermal Systems

  54. GridAMP: Asteroseismic Modeling Portal

    Matthew Woitaszek (National Center for Atmospheric Research)

    Field of Science: Cross-Disciplinary Activities

  55. Computational Studies of RNA Recognition and Catalysis

    Maria Nagan (Truman State University)

    Field of Science: Chemistry

  56. Benchmarking OpenFOAM for sediment transport simulations

    Thomas A. Hauser (Northwestern University)

    Field of Science: Advanced Scientific Computing

  57. Protein Nanocomposites for Bio-Fuel Cells and Bio-Sensors

    Venkatesan Renugopalakrishnan (Northeastern University)

    Field of Science: Chemistry

  58. CSE 260/160 - Course in Parallel Computation

    Scott B. Baden (University of California-San Diego)

    Field of Science: Computer and Computation Research

  59. Three-Dimensional Jet Noise Prediction Using Large Eddy Simulation

    Gregory A. Blaisdell (Purdue University)

    Field of Science: Advanced Scientific Computing

  60. Simulations of Magnetized Astrophysical Plasmas with Anisotropic Conduction, Viscosity, and Energetic Particles

    Ian Parrish (University of California-Berkeley)

    Field of Science: Astronomical Sciences

  61. Asteroseismic Modeling Portal (AMP)

    Travis Metcalfe (National Center for Atmospheric Research)

    Field of Science: Astronomical Sciences

  62. Petascale Simulation of Turbulent Mixing and Combustion in Stars

    Paul R. Woodward (University of Illinois at Urbana-Champaign)

    Field of Science: Astronomical Sciences

  63. Star Formation in Turbulent Magnetohydrodynamical Clouds using Adaptive Mesh Refinement

    David Collins (University of California-San Diego)

    Field of Science: Astronomical Sciences

  64. Electronic band structure investigations of complex oxides for photovoltaic applications

    Julia Medvedeva (Missouri University of Science and Technology)

    Field of Science: Materials Research

  65. Campus Champions program for University of California Santa Barbara

    Stefan Boeriu (University of California-Santa Barbara)

    Field of Science: Advanced Scientific Computing

  66. Campus Champion for Indiana University

    Scott Teige (Indiana University)

    Field of Science: Physics

  67. First-principles calculation of Pb-salt quantum dot-molecule systems

    Byung-Ryool Hyun (Cornell University)

    Field of Science: Materials Research

  68. Direct numerical simulation of separated turbulent three dimensional flows.

    Nikolaos Malamataris (George Mason University)

    Field of Science: Chemical, Thermal Systems

  69. Dynamics and Contoral of Epidemics on Networks

    Marcel Salathe (Stanford University)

    Field of Science: Environmental Biology

  70. Quantitative Prediction of Hydrogen Traps in Steels and Relation to Embrittlement Behavior

    Christopher Wolverton (Northwestern University)

    Field of Science: Materials Research

  71. Integrated antimicrobial drug discovery scheme for multi-drug resistant bacteria

    Guillermina Estiu (University of Notre Dame)

    Field of Science: Chemistry

  72. Unleashing CHIMERA: Multidimensional Supernova Simulations

    Bronson Messer (University of Tennessee, Knoxville)

    Field of Science: Astronomical Sciences

  73. Adaptive Multiscale Simulations

    Kenneth Jansen (Rensselaer Polytechnic Institute)

    Field of Science: Advanced Scientific Computing

  74. Molecular Biophysics Simulations: Neutron Scattering and Bioenergy

    Jeremy Smith (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  75. Design of high affinity monomeric streptavidin by MD simulation

    Sheldon Park (SUNY at Buffalo)

    Field of Science: Molecular Biosciences

  76. || Programming and Runtime Techniques with Charm++ and AMPI

    Celso Mendes (University of Illinois at Urbana-Champaign)

    Field of Science: Advanced Scientific Computing

  77. Framework for Performance Modeling and Prediction

    Allan Snavely (University of California-San Diego)

    Field of Science: Advanced Scientific Computing

  78. Parallel Algorithms for Particulate Flows

    George Biros (Georgia Institute of Technology)

    Field of Science: Advanced Scientific Computing

  79. Simulating The Inner Magnetospheric Environment

    Mostafa El-Alaoui (University of California-Los Angeles)

    Field of Science: Atmospheric Sciences

  80. Center for Integrated Space Weather Modeling

    Jack Quinn (Boston University)

    Field of Science: Atmospheric Sciences

  81. HPC for the NEES network

    Lelli Van Den Einde (San Diego Supercomputer Center)

    Field of Science: Mechanical and Structural Systems

  82. Modeling of Coarsening in Solid Oxide Fuel Cell Electrodes

    Hui-Chia Yu (University of Michigan)

    Field of Science: Materials Research

  83. First-Principles Molecular Dynamics for Petascale Computers

    Francois Gygi (University of California-Davis)

    Field of Science: Advanced Scientific Computing

  84. Large Eddy Simulation of Turbulent Combustion via the Filtered Density Function

    Peyman Givi (University of Pittsburgh)

    Field of Science: Chemical, Thermal Systems

  85. Modeling Physical and Mechanical Systems: Simulation and Control

    Suchuan Dong (Purdue University)

    Field of Science: Chemical, Thermal Systems

  86. Molecular Dynamics Simulations of Dense Matter

    Charles J. Horowitz (Indiana University)

    Field of Science: Astronomical Sciences

  87. Enabling Neutron Science Research with the Neutron Science TeraGrid Gateway

    John Cobb (Oak Ridge National Laboratory)

    Field of Science: Materials Research

  88. Efficient Algorithms and Software for Eigen-related Problems

    Yunkai Zhou (Southern Methodist University)

    Field of Science: Mathematical Sciences

  89. Molecular Modeling of Nanoscale Structure and Dynamics of Geologically and Environmentally Important Aqueous Solutions and Substrate-Solution Interfaces

    Andrey G. Kalinichev (Michigan State University)

    Field of Science: Earth Sciences

  90. SDCI HPC: Improvement and Release of the Uintah Computational

    Martin Berzins (University of Utah)

    Field of Science: Advanced Scientific Computing

  91. Campus Champion for Lamar University

    Lawrence Osborne (Lamar University-Beaumont)

    Field of Science: Computer and Computation Research

  92. First-Principles study on C-S-H real structure and its physical properties

    Sidney Yip (Massachusetts Institute of Technology)

    Field of Science: Electrical and Communication Systems

  93. Large Scale Molecular Dynamics Simulations of Geoliquids

    Frank Spera (University of California-Santa Barbara)

    Field of Science: Earth Sciences

  94. Structural Study of a DNA Adduct

    Suse Broyde (New York University)

    Field of Science: Molecular Biosciences

  95. Simulations of Cardiac Fluid Dynamics

    Boyce Griffith (New York University)

    Field of Science: Integrative Biology and Neuroscience

  96. N-body simulations: Planets to Cosmology

    Thomas Quinn (University of Washington)

    Field of Science: Astronomical Sciences

  97. High Performance Computing Resources in Support of Storm-Scale Numerical Weather Prediction

    Ming Xue (University of Oklahoma)

    Field of Science: Atmospheric Sciences

  98. Molecular Dynamics Simulations in Bioenergy, Bioremediation and Protein Dynamics

    Jeremy Smith (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  99. Campus Champions program for University of Richmond

    Rene Kanters (University of Richmond)

    Field of Science: Training

  100. Efficient Lattice Boltzmann Methods for Multiphase and Multicomponent Flows

    Li-Shi Luo (Old Dominion University)

    Field of Science: Mathematical Sciences

  101. The Role of Climate System Noise in Climate Variability

    James Kinter (Center for Ocean-Land-Atmosphere Studies)

    Field of Science: Atmospheric Sciences

  102. Understanding Charge and Ion Transport

    Xi Lin (Boston University)

    Field of Science: Materials Research

  103. Simulation of Quantum Systems

    David M Ceperley (University of Illinois at Urbana-Champaign)

    Field of Science: Materials Research

  104. Theoretical condensed-matter physics

    Marvin L. Cohen (University of California-Berkeley)

    Field of Science: Materials Research

  105. Lattice Strong Dynamics at the TeV scale

    George Fleming (Yale University)

    Field of Science: Physics

  106. Interaction of Time-Dependent Electromagnetic Fields with Atoms, Molecules and Bose Condenstates

    Klaus Bartschat (Drake University)

    Field of Science: Physics

  107. Enabling Breakthrough Kinetic Simulations of the Magnetosphere

    Homayoun Karimabadi (University of California-San Diego)

    Field of Science: Atmospheric Sciences

  108. Lattice Gauge Theory on MIMD Parallel Computers

    Robert Sugar (University of California-Santa Barbara)

    Field of Science: Physics

  109. Simulations of Supramolecular Biological Systems

    Klaus Schulten (University of Illinois at Urbana-Champaign)

    Field of Science: Molecular Biosciences

  110. PetaApps: New Coupling Strategies and Capabilities for Petascale Climate Modeling

    Richard Loft (National Center for Atmospheric Research)

    Field of Science: Atmospheric Sciences

  111. Molecular Modeling of Complex Biological Systems

    Clare McCabe (Vanderbilt University)

    Field of Science: Molecular Biosciences

  112. Quantum Monte Carlo Simulations

    Kenneth Jordan (University of Pittsburgh)

    Field of Science: Chemistry

  113. Structure-Function Studies on Nuclear Hormone Receptors

    Elias Fernandez (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  114. Lattice Gauge Calculation of Hadronic Physics

    Keh-Fei Liu (University of Kentucky)

    Field of Science: Physics

  115. Quantum and Classical Simulations Applied to Biomolecular Systems

    Michael Klein (Temple University)

    Field of Science: Chemistry

  116. Intermittency in Interstellar Turbulence

    Alexei Kritsuk (University of California-San Diego)

    Field of Science: Astronomical Sciences

  117. Theoretical studies of biological systems

    Alexander MacKerell, Jr. (University of Maryland, Baltimore County)

    Field of Science: Molecular Biosciences

  118. Large Suite of Dark Matter Simulations (LasDamas)

    Andreas Berlind (Vanderbilt University)

    Field of Science: Astronomical Sciences

  119. Modeling heliospheric phenomena with an MHD-kinetic code and observational boundary conditions

    Nikolai Pogorelov (University of Alabama, Huntsville)

    Field of Science: Atmospheric Sciences

  120. Large-scale atomistic simulations of materials

    Ivan Oleynik (University of South Florida)

    Field of Science: Materials Research

  121. SCEC Rupture Dynamics Code Validation

    Thomas Jordan (University of Southern California)

    Field of Science: Earth Sciences

  122. Numerical investigation of the noise radiated by supersonic jets

    Simon Mendez (Stanford University)

    Field of Science: Chemical, Thermal Systems

  123. Massively Parallel Computations of Fluid-Solid Transitions in Nanoconfined Fluids

    Peter Cummings (Vanderbilt University)

    Field of Science: Materials Research

  124. Large Scale Molecular Dynamics Simulations of the Chemomechanical Coupling in AAA Protein p97

    Jeffery Wereszczynski (University of California-San Diego)

    Field of Science: Molecular Biosciences

  125. Villous motility as a critical mechanism for efficient nutrient absorption in the small intestine

    James Brasseur (Pennsylvania State University)

    Field of Science: Molecular Biosciences

  126. The Formation and Evolution of X-ray Clusters, Galaxies, and the First Stars

    Greg L. Bryan (Columbia University in the City of New York)

    Field of Science: Astronomical Sciences

  127. Multi-scale molecular simulations of macromolecular interactions in living systems

    Margaret Cheung (University of Houston)

    Field of Science: Molecular Biosciences

  128. Next-Generation Force Fields from Accurate Quantum Chemical Calculations

    Karl F. Freed (University of Chicago)

    Field of Science: Chemistry

  129. Campus Champions Program for the University of Virginia

    Katherine Holcomb (University of Virginia)

    Field of Science: Cross-Disciplinary Activities

  130. Particles in bidisperse and wall-bounded shear flow suspensions

    Martin Maxey (Brown University)

    Field of Science: Chemical, Thermal Systems

  131. Simulate the Diffuse Hot Gas in M31 Bulge

    Daniel Q. Wang (University of Massachusetts, Amherst)

    Field of Science: Astronomical Sciences

  132. Eddy diffusivities in the Southern Ocean from an eddying model

    Alexa Griesel (Scripps Institution of Oceanography)

    Field of Science: Ocean Sciences

  133. Free Energy Calculations of Protein Kinase Inhibitor Interactions

    Adrian Elcock (University of Iowa)

    Field of Science: Molecular Biosciences

  134. Kinetic Dissipation of Astrophysical Plasma Turbulence

    Gregory Howes (University of Iowa)

    Field of Science: Physics

  135. Ultrashort Intense Laser-Matter Interactions

    Suxing Hu (University of Rochester)

    Field of Science: Physics

  136. Investigating Scale-Out Performance of Loosely-Coupled Simulations Using Multiple Distributed Resources on the TeraGrid. Understanding the Energetics and Conformational Configurations of Nucleic Acids

    Shantenu Jha (Louisiana State University)

    Field of Science: Molecular Biosciences

  137. Campus Champion for Penn State

    Jeffrey J. Nucciarone (Pennsylvania State University)

    Field of Science: Training

  138. Circumstellar Astrophysics: Disks, Winds, Shells, and Shocks

    John M. Blondin (North Carolina State University at Raleigh)

    Field of Science: Astronomical Sciences

  139. Scalable Performance Tools for Blue Waters.

    Robert J. Fowler (University of North Carolina, Chapel Hill)

    Field of Science: Advanced Scientific Computing

  140. Space-time Loadings on Wind Turbine Blades driven by Atmospheric Boundary Layer Turbulence: Coupling LES and DES

    Michael Kinzel (Pennsylvania State University)

    Field of Science: Atmospheric Sciences

  141. DNS of particle-laden turbulent flows

    Antonino Ferrante (University of Washington)

    Field of Science: Chemical, Thermal Systems

  142. Application of PTMap2 for protein posttranslational modification analysis

    Yingming Zhao (University of Chicago)

    Field of Science: Molecular Biosciences

  143. Atomistic simulations of mechanical and physical properties of nano-twinned metals and semiconductors

    Huajian Gao (Brown University)

    Field of Science: Mechanical and Structural Systems

  144. Determining Functional Domains from Genomic Data Using Supercomputers

    Igor Jouline (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  145. Computational Biophysics: Application of Advanced Algorithms to Protein Folding

    Jim Pfaendtner (University of Washington)

    Field of Science: Molecular Biosciences

  146. Large Scale Simulation of Membrane Channels and Transporters

    Emad Tajkhorshid (University of Illinois at Urbana-Champaign)

    Field of Science: Molecular Biosciences

  147. Calculation of spontaneous fission process

    Andrzej Staszczak (University of Tennessee, Knoxville)

    Field of Science: Physics

  148. Genome Analysis

    Zheng Liu (University of Texas at Austin)

    Field of Science: Biological and Critical Systems

  149. US Navy DSRC

    Lee Whatley (DoD HPCMP)

    Field of Science: Training

  150. Mass parameters for fissionig nuclei

    Andrzej Baran (University of Tennessee, Knoxville)

    Field of Science: Physics

  151. Molecular Dynamics Simulation of Electroporation

    Xiaopeng Zhao (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  152. federal interagency benchmarking project

    Robert Maier (USACE ERDC)

    Field of Science: Computer and Computation Research

  153. High Performance Computing Resources in Support of Spatiotemporal Relational Data Mining for Tornado Anticipation

    Amy McGovern (University of Oklahoma)

    Field of Science: Atmospheric Sciences

  154. Computer Aided Analysis of Tunneling Field-Effect Transistors

    Mathieu Luisier (Purdue University)

    Field of Science: Physics

  155. Global tropospheric chemical transport of passive tracers using the multiscale model framework

    William Collins (Lawrence Berkeley National Laboratory)

    Field of Science: Atmospheric Sciences

  156. Development of Compressible Immersed Boundary Solvers for Complex Flows and Aeroacoustics

    Jung-Hee Seo (Johns Hopkins University)

    Field of Science: Mathematical Sciences

  157. Development of Scalable Unstructured Flow Solver for Incompressible Fluid Flow Problems (SunFlo3DI) and Data Centric Computing for Scientific Visualization

    Resat Payli (Indiana University-Purdue University, Indianapolis)

    Field of Science: Chemical, Thermal Systems

  158. Optimization of the nuclear energy density functional

    Erno Kortelainen (University of Tennessee)

    Field of Science: Physics

  159. Modeling Studies of Nano and Biomolecular Systems

    Adrian Roitberg (University of Florida)

    Field of Science: Molecular Biosciences

  160. MILC code development

    Steven Gottlieb (Indiana University)

    Field of Science: Physics

  161. Innovative Computing Research (algorithms, parallel and HPC Computing)

    Jack Dongarra (University of Tennessee, Knoxville)

    Field of Science: Advanced Scientific Computing

  162. Large-scale ecological and phenotypic diversification models

    Sergey Gavrilets (University of Tennessee, Knoxville)

    Field of Science: Environmental Biology

  163. Molecular Biophysics Simulations: Neutron Scattering and Bioenergy

    Jeremy Smith (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  164. NIMBioS

    Michael Vose (University of Tennessee, Knoxville)

    Field of Science: Cross-Disciplinary Activities

  165. Biophysical Modeling and Simulation

    Gregory A. Voth (University of Chicago)

    Field of Science: Molecular Biosciences

  166. Computational Genomics

    Igor Jouline (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  167. Multiscale Materials Modeling

    David Keffer (University of Tennessee, Knoxville)

    Field of Science: Materials Research

  168. Porting Tenasi benchmarking code

    Lafayette Taylor (University of Tennessee, Chattanooga)

    Field of Science: Advanced Scientific Computing

  169. Gordon Bell project - dedicated run

    Thomas Schulthess (ORNL)

    Field of Science: Computer and Computation Research

  170. Molecular Dynamics simulations

    Jeremy Smith (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  171. Ab-initio Molecular Dynamics Investigation of Complex Hydride Kinetics

    Christopher Wolverton (Northwestern University)

    Field of Science: Materials Research

  172. Campus Champions-Clemson University

    James von Oehsen (Clemson University)

    Field of Science: Mathematical Sciences

  173. An International, Dedicated High-End Computing Project to Revolutionize Climate Modeling

    Cristiana Stan (Center for Ocean-Land-Atmosphere Studies)

    Field of Science: Atmospheric Sciences

  174. Simulations of Magnetized Relativistic Accretion Disks and Jets

    Ramesh Narayan (Harvard University)

    Field of Science: Astronomical Sciences

  175. Free energy calculations guided design of inhibitors of protein-protein interactions

    Julien Michel (Yale University)

    Field of Science: Chemistry

  176. Multiscale Modeling of Biomembranes

    Roland Faller (University of California-Davis)

    Field of Science: Molecular Biosciences

  177. ADIOS

    Scott Klasky (ORNL)

    Field of Science: Advanced Scientific Computing

  178. Macromolecular and Cell Simulations

    Thomas Kepler (Duke University)

    Field of Science: Molecular Biosciences

  179. Reciprocal BLAST Analysis of the UniProt Knowledgebase

    Cathy Wu (Georgetown University)

    Field of Science: Molecular Biosciences

  180. Campus Champion Account

    Vikram Gazula (University of Kentucky)

    Field of Science: Cross-Disciplinary Activities

  181. Investigations of Colossal Magnetoresistive and Multiferroic Manganites Using Realistic Two-Orbital Models with Disorder

    Cengiz Sen (University of Tennessee)

    Field of Science: Materials Research

  182. Ab-initio Molecular Dynamics Investigation of Complex Hydride Kinetics

    Christopher Wolverton (Northwestern University)

    Field of Science: Materials Research

  183. Porting and scalability evaluation of the Scalasca toolset

    Mahin Mahmoodi (Carnegie Mellon University)

    Field of Science: Advanced Scientific Computing

  184. A case study of using TeraGrid for large-scale medical image analysis

    Andriy Fedorov (Brigham and Womens Hospital)

    Field of Science: Advanced Scientific Computing

  185. ICMR/UC Santa Barbara Summer School on Materials Modeling

    Francois Gygi (University of California-Davis)

    Field of Science: Materials Research

  186. Campus Champion for the University of Virginia

    Thomas Hall (University of Virginia)

    Field of Science: Advanced Scientific Computing

  187. Coupling of Turbulent Compressible Solar Convection with Rotation, Shear and Magnetic Fields

    Juri Toomre (University of Colorado)

    Field of Science: Astronomical Sciences

  188. Toward Petascale Cosmology with GADGET

    Tiziana Di Matteo (Carnegie Mellon University)

    Field of Science: Astronomical Sciences

  189. Numerical Relativity and Black Hole Mergers

    Erik Schnetter (Louisiana State University)

    Field of Science: Physics

  190. Kinetic Simulations of Ionospheric Waves and Turbulence

    Meers Oppenheim (Boston University)

    Field of Science: Atmospheric Sciences

  191. Simulations of Semiconductor Nanoparticles

    Giulia Galli (University of California-Davis)

    Field of Science: Materials Research

  192. Simulations of Biomolecular Structure and Dynamics

    Carlos Simmerling (SUNY at Stony Brook)

    Field of Science: Molecular Biosciences

  193. Scaling in Turbulence and Turbulent Mixing

    Pui-kuen Yeung (Georgia Institute of Technology)

    Field of Science: Chemical, Thermal Systems

  194. Direct numerical and large-eddy simulation of complex turbulent flows

    Krishnan Mahesh (University of Minnesota)

    Field of Science: Chemical, Thermal Systems

  195. Lattice Field Theory Simulations

    John B. Kogut (University of Maryland, College Park)

    Field of Science: Physics

  196. Developing Grid Aware Reservoir Simulation Tools and Technologies

    Yaakoub El Khamra (University of Texas at Austin)

    Field of Science: Design and Manufacturing Systems

  197. Creating High Resolution Tornado Simulations for Spatiotemporal Data Mining

    Amy McGovern (University of Oklahoma)

    Field of Science: Atmospheric Sciences

  198. Computational Studies of Cosmological Structure on the Largest Scales: Galaxy Clusters and Filaments

    Eric Hallman (Harvard University)

    Field of Science: Astronomical Sciences

  199. Climate Modeling

    Peter Gent (National Center for Atmospheric Research)

    Field of Science: Atmospheric Sciences

  200. UT Course CS594

    Jack Dongarra (University of Tennessee, Knoxville)

    Field of Science: Cross-Disciplinary Activities

  201. UT Course (Data Structures and Algorithm Analysis)

    David Banks (University of Tennessee, Knoxville)

    Field of Science: Computer and Computation Research

  202. UTK Molecular Biophysics Class BCMB 420/560/610

    Roland Schulz (Oak Ridge National Laboratory)

    Field of Science: Molecular Biosciences

  203. Investigation of Performance Variability on Cray XT5

    Patrick Worley (ORNL)

    Field of Science: Computer and Computation Research

  204. Cray XT Cross-System Comparisons

    Kurt Carlson (University of Alaska (UAF))

    Field of Science: Computer and Computation Research

  205. Theoretical Studies of the De-wetting Mechanims of Metallic Thin-Films

    Miguel Fuentes-Cabrera (University of Tennessee, Knoxville)

    Field of Science: Materials Research

  206. Newton program

    Gerald Ragghianti (University of Tennessee, Knoxville)

    Field of Science: Advanced Scientific Computing

  207. Performance Modeling and Characterization (PMaC)

    Laura Carrington (University of California-San Diego)

    Field of Science: Advanced Scientific Computing

  208. Modeling thunderstorms and tornados

    Robert Wilhelmson (University of Illinois at Urbana-Champaign)

    Field of Science: Atmospheric Sciences

  209. Protein Structure Modelling

    Yaohang Li (North Carolina A&T State University)

    Field of Science: Molecular Biosciences

  210. Molecular Dynamics Studies in Describing The Molecular Basis of Infertility and Thyroid Conditions

    Angelo Rossi (University of Medicine and Dentistry of New Jersey)

    Field of Science: Molecular Biosciences

  211. Turbulent Solar and Stellar Convection and Magnetic Dynamos

    Juri Toomre (University of Colorado)

    Field of Science: Astronomical Sciences

  212. Global Modeling of Earths Magnetosphere

    Joachim Raeder (University of New Hampshire)

    Field of Science: Atmospheric Sciences

  213. A Residual Based Turbulence Model for Large Eddy Simulation

    Arif Masud (University of Illinois at Chicago)

    Field of Science: Mathematical Sciences

  214. High resolution simulations of tornadic vortices

    Amy McGovern (University of Oklahoma)

    Field of Science: Atmospheric Sciences

  215. Analysis

    Mathieu Luisier (Purdue University)

    Field of Science: Design and Manufacturing Systems

  216. Multi-scale Modeling in Proton Exchange Membrane

    Stephen Paddison (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  217. Coupled-Cluster theory for nuclei

    Gaute Hagen (ORNL)

    Field of Science: Physics

  218. Plasma Physics Simulations using VPIC

    Ben Bergen (Los Alamos National Laboratory)

    Field of Science: Physics

  219. High-Performance Scientific Computing

    Elizabeth R. Jessup (University of Colorado)

    Field of Science: Educational

  220. Probing Attosecond Electron-Correlation Dynamics in Atoms

    Suxing Hu (University of Rochester)

    Field of Science: Physics

  221. Constrained Galaxy Formation & Evolution

    Emilio Romano-Diaz (University of Kentucky)

    Field of Science: Astronomical Sciences

  222. Campus Champion for University of Arkansas

    Jeff Pummill (University of Arkansas)

    Field of Science: Training

  223. Social Informatics Data Grid

    Sarah Kenny (University of Chicago)

    Field of Science: Behavioral and Neural Sciences

  224. Quantum Monte Carlo Calculation of the Perovskite to Post-Perovskite Phase Transition

    Burkhard Militzer (University of California-Berkeley)

    Field of Science: Earth Sciences

  225. DNA transport and sequencing through a quadrupole gate

    Predrag Krstic (ORNL)

    Field of Science: Molecular Biosciences

  226. Aqua: Simulating an Adiabatic Quantum Algorithm

    Jeffrey Vetter (ORNL)

    Field of Science: Advanced Scientific Computing

  227. Nuclear Structure Calculations

    Junchen Pei (University of Tennessee, Knoxville)

    Field of Science: Physics

  228. Fission Studies of Superheavy Nuclei

    Javid Sheikh (University of Tennessee, Knoxville)

    Field of Science: Physics

  229. Energy Density Functional With Density Dependent Coupling Constants

    Mario Stoitsov (University of Tennessee, Knoxville)

    Field of Science: Physics

  230. Multiscale modeling of dynamics of complex fluids

    Bamin Khomami (University of Tennessee, Knoxville)

    Field of Science: Materials Research

  231. Scalable Computational Methods for the Analysis of High-Throughput Biological Data

    Michael Langston (University of Tennessee, Knoxville)

    Field of Science: Molecular Biosciences

  232. Coarse-grained Monte Carlo simulations

    Petr Plechac (University of Tennessee, Knoxville)

    Field of Science: Advanced Scientific Computing

  233. First-principles studies of semiconductor and hydrogen storage materials

    Chris Van de Walle (University of California-Santa Barbara)

    Field of Science: Materials Research

  234. LES and DNS of Turbulent Spatially Evolving Boundary Layers in Pressure Gradient Flows Via Multi-Scale Method

    Luciano Castillo (Rensselaer Polytechnic Institute)

    Field of Science: Chemical, Thermal Systems

  235. Optimization of a physics-based united-residue force-field (UNRES) for protein folding simulation

    Harold Scheraga (Cornell University)

    Field of Science: Molecular Biosciences

  236. Computational studies on lignin model compounds

    Ariana Beste (ORNL)

    Field of Science: Chemistry

  237. Genetic Network Inference from Massive Genomic Datasets

    Yan Cui (University of Tennessee, Memphis)

    Field of Science: Molecular Biosciences

  238. First-Principles Calculation on Impurity Diffusivities in Ferritic Iron

    Peter Liaw (University of Tennessee, Knoxville)

    Field of Science: Materials Research

  239. Nuclear Structure Theory

    Thomas Papenbrock (University of Tennessee, Knoxville)

    Field of Science: Materials Research

  240. Benchmarking of PICMSS for CFD Simulation

    Kwai L. Wong (University of Tennessee, Knoxville)

    Field of Science: Mechanical and Structural Systems

  241. Calibration System Development

    Fanyou Kong (Atmospheric Technology Services Co)

    Field of Science: Atmospheric Sciences

  242. Artificial DNAs

    Miguel Fuentes-Cabrera (University of Tennessee, Knoxville)

    Field of Science: Cross-Disciplinary Activities

  243. Simulating Cosmic Reionization and Large-Scale Structure: 3D Radiative Transfer and Gravitational N-body Dynamics

    Paul Shapiro (University of Texas at Austin)

    Field of Science: Astronomical Sciences

  244. NICS National Education Award

    Phil Andrews (National Institute for Computational Sciences)

    Field of Science: Cross-Disciplinary Activities

  245. Simulations of Strongly Correlated Systems

    Juana Moreno (Louisiana State University)

    Field of Science: Materials Research

  246. Numerical methods for aeroacoustics and turbulence

    Fang Hu (Old Dominion University)

    Field of Science: Mathematical Sciences

  247. 3D Core-collapse Supernova Simulations

    Adam Burrows (Princeton University)

    Field of Science: Astronomical Sciences

  248. High energy grazing collisions of black holes

    Ulrich Sperhake (California Institute of Technology)

    Field of Science: Physics

  249. A Study of Flow-Structure Interaction in Complex Biological Systems Using a Parallelized Immersed Boundary Solver

    Rajat Mittal (Johns Hopkins University)

    Field of Science: Chemical, Thermal Systems

  250. Large Eddy Simulations of Gas Turbine Heat Transfer and Aerodynamics

    Andrew Duggleby (Texas A&M University)

    Field of Science: Chemical, Thermal Systems

  251. Theoretical study of the few body problem

    Don Madison (Missouri University of Science and Technology)

    Field of Science: Physics

  252. High Performance Computing: tools and algorithms.

    Leopold Grinberg (Brown University)

    Field of Science: Mathematical Sciences

  253. NMSZ-Hazard: New Madrid Seismic Zone Ground Motion Simulations

    Leonardo Ramirez-Guzman (US Geological Survey)

    Field of Science: Earth Sciences

  254. The Formation of Active Regions on the Sun

    Matthias Rempel (National Center for Atmospheric Research)

    Field of Science: Astronomical Sciences

  255. First Principles Based Modeling of Proton Diffusion in Decorated Carbon Nanotubes as Structurally Defined Systems for Proton Exchange Membranes

    Stephen Paddison (University of Tennessee, Knoxville)

    Field of Science: Materials Research

  256. Fully resolved simulation of self-propelling fish

    Neleesh Patankar (Northwestern University)

    Field of Science: Chemical, Thermal Systems

  257. Understanding cellulose and cellulose-degrading enzymes for biofuels applications

    Gregg Beckham (National Renewable Energy Laboratory)

    Field of Science: Molecular Biosciences

  258. Scalable Simulations of Turbulent Combustion using the LES/FDF/ISAT Methodology

    Stephen Pope (Cornell University)

    Field of Science: Chemical, Thermal Systems

  259. Campus Champion for Howard University

    Marcus Alfred (Howard University)

    Field of Science: Training

  260. Computational MHD for Astrophysical Systems

    John Hawley (University of Virginia)

    Field of Science: Astronomical Sciences

  261. Molecular simulations of supercritical fluids

    Hai-Lung Tsai (Missouri University of Science and Technology)

    Field of Science: Chemical, Thermal Systems

  262. Campus Champion for University of Oklahoma

    Henry Neeman (University of Oklahoma)

    Field of Science: Cross-Disciplinary Activities

  263. Using Adaptivity to Enable Timely Hazardous Mass Flow Modeling and Risk Analysis

    Abani K. Patra (SUNY at Buffalo)

    Field of Science: Mathematical Sciences

  264. Hybrid Particle Element Method for Impact Dynamics Simulation

    Eric Fahrenthold (University of Texas at Austin)

    Field of Science: Mechanical and Structural Systems

  265. Quantum Monte Carlo Study of Lattice Hardcore Bosons with Diagonal Random Disorder

    Kaushik Mitra (National Institute of Standards & Technology)

    Field of Science: Materials Research

  266. Quantum State-to-State Reaction Dynamics

    Aron Kuppermann (California Institute of Technology)

    Field of Science: Chemistry

  267. Numerical Linked-Cluster Algorithms for Frustrated and Inhomogeneous Quantum-Mechanical Systems

    Ehsan Khatami (Georgetown University)

    Field of Science: Materials Research

  268. Campus Champion for Marshall University

    Jack Smith (Marshall University)

    Field of Science: Advanced Scientific Computing

  269. TeraGrid Campus Champion allocation for University of Washington

    Jeffrey Gardner (University of Washington)

    Field of Science: Training

  270. Campus Champion for U. S. Naval Academy

    Don Garner (US Naval Academy)

    Field of Science: Educational

  271. Villous Motility as a Critical Mechanism for Efficient Nutrient Absorption in the Small Intestine

    James Brasseur (Pennsylvania State University)

    Field of Science: Molecular Biosciences

  272. Campus Champions program for University of Pittsburgh

    Server Yilmaz (University of Pittsburgh)

    Field of Science: Educational

  273. HPC course and module development

    Angela Shiflet (Wofford College)

    Field of Science: Computer and Computation Research

  274. Large-scale molecular dynamics and Brownian dynamics investigation of ion permeation through the ligand-gated ion channel

    Hongying Cheng (University of Pittsburgh)

    Field of Science: Molecular Biosciences

  275. Formation of Interstellar Molecular Clouds: Parker Instability with Phase Transitions

    Telemachos Mouschovias (University of Illinois at Urbana-Champaign)

    Field of Science: Astronomical Sciences

  276. Active Flow Control for Wind Turbine Applications

    Andreas Gross (University of Arizona)

    Field of Science: Chemical, Thermal Systems

  277. Texas State University - Campus Champion

    Daniel Bylander (Texas State University)

    Field of Science: Training

  278. Investigating Anesthesia Mechanisms through Study on Interactions between Anesthetics Molecules and Ligand-gated Ion Channels: Large-Scale Molecular Dynamics Simulation

    Lu Liu (University of Pittsburgh School of Medicine)

    Field of Science: Molecular Biosciences

  279. Nuclear Structure Calculations for weakly bound nuclei

    George Papadimitriou (University of Tennessee)

    Field of Science: Physics

  280. Campus Champions Program - Yale University

    Brian Dobbins (Yale University)

    Field of Science: Computer and Computation Research

  281. Object Based Caching for MPI-IO

    Phillip Dickens (University of Maine)

    Field of Science: Networking and Communications Research

  282. Atomic and Molecular Collision Dynamics using Petascale Computing Systems

    Francis Robicheaux (Auburn University)

    Field of Science: Physics

  283. Development and Application of Advanced Molecular Dynamics Algorithms

    Ross Walker (University of California-San Diego)

    Field of Science: Molecular Biosciences

  284. Monte Carlo ensemble generation and correlation matrix element computations for hadronic physics on anisotropic lattices

    Colin Morningstar (Carnegie Mellon University)

    Field of Science: Physics

  285. Simulation Studies of clinically observed JAK2 mutations

    Tai-Sung Lee (University of Minnesota)

    Field of Science: Molecular Biosciences

  286. Campus Champions program for Case Western Reserve University

    Roger Bielefeld (Case Western Reserve University)

    Field of Science: Training

  287. Campus Champion Program for Monmouth College

    Christopher Fasano (Monmouth College)

    Field of Science: Physics

  288. Computational Biophysics: Advanced Techniques for Protein Folding

    Jim Pfaendtner (University of Washington)

    Field of Science: Molecular Biosciences

  289. Molecular Dynamics Simulations of a G-protein-coupled receptor (GPCR) Signalosome: the Complex of Opsin with the Heterotrimeric G-Protein Transducin

    Thomas Huber (Rockefeller University)

    Field of Science: Molecular Biosciences

  290. Numerical Relativity / Analytical Relativity Collaboration

    Erik Schnetter (Louisiana State University)

    Field of Science: Astronomical Sciences

  291. Parallelization of a Finite Element Code for Petascale Dynamics Modeling

    Yifeng Cui (San Diego Supercomputer Center)

    Field of Science: Computer and Computation Research

  292. Campus Champion for The University of Wisconsin - Eau Claire

    Daniel Ernst (University of Wisconsin-Eau Claire)

    Field of Science: Computer and Computation Research

  293. Advanced Computational Techniques for Fire Suppression Systems

    Sophia Lefantzi (United Technologies Research Center)

    Field of Science: Chemical, Thermal Systems

  294. Structure Prediction of G Protein-Coupled Receptors

    Ravinder Abrol (California Institute of Technology)

    Field of Science: Molecular Biosciences

  295. SAM Radical Proteins

    Catherine Drennan (Massachusetts Institute of Technology)

    Field of Science: Molecular Biosciences

  296. Brownian dynamics with hydrodynamic interactions

    Tamara Frembgen-Kesner (University of Iowa)

    Field of Science: Molecular Biosciences

  297. Campus Champions program for Binghamton University

    James Wolf (SUNY at Binghamton)

    Field of Science: Training

  298. Campus Champion for Merrimack College

    David Toth (Merrimack College)

    Field of Science: Training

  299. Campus Champion for Temple University, College of Science and Technology

    Axel Kohlmeyer (Temple University)

    Field of Science: Training

  300. Systematics of Nuclear Surface Vibrations in Deformed Nuclei

    Jonathan Engel (University of North Carolina, Chapel Hill)

    Field of Science: Physics

  301. NAMD Tuning and Support

    James Phillips (University of Illinois at Urbana-Champaign)

    Field of Science: Molecular Biosciences

  302. Mathematical Modeling of Heart Rhythm Disorders

    Xiaopeng Zhao (University of Tennessee, Knoxville)

    Field of Science: Biological and Critical Systems

  303. Freeprop

    James Sternberg (University of Tennessee)

    Field of Science: Physics

  304. Pre-reactive complexes of hydroxyl radical

    Rudolf Burcl (Marshall University)

    Field of Science: Chemistry

  305. Computational investigation on diffusional mechanism in metallic glassess

    Yujie Wei (University of Alabama)

    Field of Science: Materials Research

  306. Lattice QCD Study of Hadronic Interactions

    Martin Savage (University of Washington)

    Field of Science: Physics

  307. Molecular Simulation of Membrane Receptors

    Cameron Abrams (Drexel University)

    Field of Science: Molecular Biosciences

  308. Scalable three-dimensional adaptive and non-adaptive spectral methods for the study of nonlinear phenomena in the geosciences

    Duane Rosenberg (National Center for Atmospheric Research)

    Field of Science: Advanced Scientific Computing

  309. Evaluation and Optimization of a Parallel Immersed Boundary Flow Solver for Biological Applications

    Rajat Mittal (Johns Hopkins University)

    Field of Science: Chemical, Thermal Systems

  310. Molecular dynamics simulations of A-beta protein aggregation

    Jie (Jessy) Li (University of California-Davis)

    Field of Science: Molecular Biosciences

  311. CAPS Spring Run

    Ming Xue (University of Oklahoma)

    Field of Science: Atmospheric Sciences

  312. Description of Weak Interactions by Density Functional Theory

    Alvaro Vazquez-Mayagoitia (University of Tennessee, Knoxville)

    Field of Science: Chemistry

  313. Global Kinetic Simulations of the Magnetosphere

    Homayoun Karimabadi (University of California-San Diego)

    Field of Science: Atmospheric Sciences

  314. Nonlinear Optical Interaction of Nanoparticles

    Scott Fraser (California Institute of Technology)

    Field of Science: Molecular Biosciences

  315. Prediction of Themodynamic and Kinetic Properties of Lignin Model Compounds

    Jarod Younker (Oak Ridge Institute for Science and Education)

    Field of Science: Chemistry

  316. Deformed QRPA with Energy-Density Functionals

    Jonathan Engel (University of North Carolina, Chapel Hill)

    Field of Science: Physics

  317. Benchmarking Weather Research and Forecasting (WRF) Model

    Donald Morton (University of Alaska, Fairbanks)

    Field of Science: Computer and Computation Research

  318. Preparing to Swim in Blue Waters: Cosmic Re-Ionization at Full Scale on NICS Kraken

    Robert Harkness (University of California-San Diego)

    Field of Science: Astronomical Sciences

  319. Constraint of density functional theory from coupled cluster calculations

    Jason Holt (University of Tennessee)

    Field of Science: Physics

  320. Campus Champion for the University of Oregon

    Sean Sharp (University of Oregon)

    Field of Science: Training

  321. Research, implementation and testing of an ultra-scalable 3D FFT library

    Dmitry Pekurovsky (University of California-San Diego)

    Field of Science: Advanced Scientific Computing

  322. Elastic-Viscoelastic properties of Soft Biological Tissues from Magnetic Resonance Elastography: Inverse Finite Element Simulations

    Ravi Namani (Washington University in St. Louis)

    Field of Science: Mechanical and Structural Systems

  323. Folding studies of the Alzheimer amyloid beta-protein in confined environments using all-atom molecular dynamic simulations

    Srinivasa Rao Jampani (Drexel University)

    Field of Science: Molecular Biosciences

  324. Computational Mutagenesis Studies for Cancer Related Biomolecules

    Tai-Sung Lee (University of Minnesota)

    Field of Science: Molecular Biosciences

  325. Computational studies of complex processes in biological macromolecular systems

    Benoit Roux (University of Chicago)

    Field of Science: Molecular Biosciences

  326. Structural and Functional Characterization of Glu-Plasminogen and Lys-Plasminogen

    Hyung Joon Kim (Carnegie Mellon University)

    Field of Science: Molecular Biosciences

  327. Structure, energetics, vibrational spectroscopy, and phase transition of materials for energy and geochemical applications

    Jianwei Wang (University of Michigan)

    Field of Science: Materials Research

  328. Effects of entrance geometry on red blood cell motion through pores: Parallel simulations

    Igor Pivkin (Massachusetts Institute of Technology)

    Field of Science: Molecular Biosciences

  329. Accelerating the solution of large scale eigenvalue problems in density functional theory

    Yunkai Zhou (Southern Methodist University)

    Field of Science: Mathematical Sciences

  330. Multiscale Modeling of Carbon-Based Nanomaterials

    Boris Yakobson (Rice University)

    Field of Science: Materials Research

  331. Gravitational and Electromagnetic Dynamics around Black Holes

    Manuel Tiglio (University of Maryland, College Park)

    Field of Science: Physics

  332. Molecular Dynamics Simulations of Crystallization in Astrophysical Plasmas

    Charles J. Horowitz (Indiana University)

    Field of Science: Astronomical Sciences

  333. TG-PHY100019 Anharmonic Vibrational Analysis beyond CCSD(T)

    Kalju Kahn (University of California-Santa Barbara)

    Field of Science: Physics

  334. Surface Adsorption on Terraces and Nanotubes

    Alain Phares (Villanova University)

    Field of Science: Chemistry

  335. Computational Micro and Nanophotonics

    Shanhui Fan (Stanford University)

    Field of Science: Electrical and Communication Systems

  336. Salt and Co-Solvent Effects for Proteins and Nucleic Acids

    B. Montgomery Pettitt (University of Houston)

    Field of Science: Chemistry

  337. Ab-initio Simulations of Materials Properties

    John D. Joannopoulos (Massachusetts Institute of Technology)

    Field of Science: Materials Research

  338. Multi-Scale Simulation of Multiphase Interface Dynamics in
Complex Turbulent Flows

    Marcus Herrmann (Arizona State University)

    Field of Science: Chemical, Thermal Systems

  339. Collisionless Dissipative Processes in the Magnetotail and at the Magnetopause Boundary

    Philip Pritchett (University of California-Los Angeles)

    Field of Science: Atmospheric Sciences

  340. Large scale MD simulations of anesthetic effects on ion channels

    Pei Tang (University of Pittsburgh School of Medicine)

    Field of Science: Molecular Biosciences

  341. Simulations of Molecular Clouds and Protoplanetary Disks

    Mordecai-Mark Mac Low (American Museum of Natural History)

    Field of Science: Astronomical Sciences

  342. Calculations of single-scattering properties of small ice crystals in cirrus for climate implication

    Jun Shik Um (University of Illinois at Urbana-Champaign)

    Field of Science: Atmospheric Sciences

  343. Computational Study of Astrophysical Plasmas in the Regime of Relativistic Jets

    Ken-Ichi Nishikawa (University of Alabama, Huntsville)

    Field of Science: Astronomical Sciences

  344. Studying the Detailed Physics of the Intracluster Medium in Clusters of Galaxies with the FLASH Code

    John ZuHone (Harvard University)

    Field of Science: Astronomical Sciences

  345. Structure Based Design of Cell Penetrating Peptides

    Sandhya Kortagere (Drexel University)

    Field of Science: Molecular Biosciences

  346. Resolving ocean mesoscale eddies in climate change simulations

    Frank Bryan (National Center for Atmospheric Research)

    Field of Science: Atmospheric Sciences

  347. A Theoretical Investigation of the Molecular Constituents of Oil Shale

    Carol Parish (University of Richmond)

    Field of Science: Chemistry

  348. Computational modeling of ultracold molecular collisions and reactions involving clusters and nanoparticles

    Balakrishnan Naduvalath (University of Nevada-Las Vegas)

    Field of Science: Chemistry

  349. Computing Conformational Change in Biomolecular Systems

    Thomas Woolf (Johns Hopkins University)

    Field of Science: Molecular Biosciences

  350. Campus Champion for the University of Montana

    John Lucotch (University of Montana)

    Field of Science: Training

  351. Molecular Simulation of Structured Nano-Phases: Confinement Effects, Reaction, Diffusion, and Modeling of Disordered Nanoporous Carbons and Supercapacitor Materials

    Keith E. Gubbins (North Carolina State University at Raleigh)

    Field of Science: Chemistry

  352. The Excited Hadron Spectrum Using Single- and Multi-Hadron Operators

    Colin Morningstar (Carnegie Mellon University)

    Field of Science: Physics

  353. CAPS Spring Runs - 2010

    Ming Xue (University of Oklahoma)

    Field of Science: Atmospheric Sciences

  354. Atomistic simulations of carbon nanotubes entering cells

    Robert Hurt (Brown University)

    Field of Science: Molecular Biosciences

  355. CIG Science Gateway and Community Codes for the Geodynamics Community

    Michael C. Gurnis (California Institute of Technology)

    Field of Science: Earth Sciences

  356. Direct numerical simulation of turbulent flow over a surface mounted obstacle

    Nikolaos Malamataris (George Mason University)

    Field of Science: Chemical, Thermal Systems

  357. Magnetohydrodynamics of the solar interior

    Nicholas Brummell (University of California-Santa Cruz)

    Field of Science: Astronomical Sciences

  358. Multiscale Models for Biological Engineering

    Yiannis N. Kaznessis (University of Minnesota)

    Field of Science: Molecular Biosciences

  359. Large scale simulations of multiple scattering of waves in random media and rough surfaces

    Leung Tsang (University of Washington)

    Field of Science: Earth Sciences

  360. Ligand binding mechanism in the visual photoreceptor opsin, a G-protein-coupled receptor (GPCR)

    Thomas Huber (Rockefeller University)

    Field of Science: Molecular Biosciences

  361. Loosely-coupled programming for highly-parallel applications

    Michael Wilde (University of Chicago)

    Field of Science: Computer and Computation Research

  362. Development of PTMap2.0 for genome-wide protein posttranslational modification analysis

    Yingming Zhao (University of Chicago)

    Field of Science: Molecular Biosciences

  363. Supercell/Tornado Genesis, Structure and Evolution Studies

    Robert Wilhelmson (University of Illinois at Urbana-Champaign)

    Field of Science: Atmospheric Sciences

  364. Lattice-Boltzmann Studies of Turbulence, Blood flow and Liquid Crystals, and Molecular Dynamics Studies for Nanoscience and Immunology

    Bruce Boghosian (Tufts University)

    Field of Science: Advanced Scientific Computing

  365. Development of a Multiphysics Thermal analysis code on GPU cluster

    Kwai L. Wong (University of Tennessee, Knoxville)

    Field of Science: Chemical, Thermal Systems

  366. Direct Numerical Simulation of Particle-laden Turbulent Flows

    Lance Collins (Cornell University)

    Field of Science: Chemical, Thermal Systems

  367. Performance Evaluation Using the TAU Performance System

    Sameer Shende (University of Oregon)

    Field of Science: Advanced Scientific Computing

  368. Simulations of Binary Black Hole Systems

    Pablo Laguna (Georgia Institute of Technology)

    Field of Science: Physics

  369. First principles study of the atomistic-level structure of C-S-H

    Franz-Josef Ulm (Massachusetts Institute of Technology)

    Field of Science: Physics

  370. Modeling Studies of Nano and Biomolecular Systems

    Adrian Roitberg (University of Florida)

    Field of Science: Molecular Biosciences

  371. Simulations of Cellulose I with multiple force fields

    James Matthews (National Renewable Energy Laboratory)

    Field of Science: Molecular Biosciences

  372. Linked Environments for Atmospheric Discovery

    Suresh Marru (Indiana University)

    Field of Science: Atmospheric Sciences

  373. Exploratory Research and Education with Kraken

    Gregory Peterson (Univ of Tennessee/EECS Department)

    Field of Science: Cross-Disciplinary Activities

  374. Earthquake ground motion simulations in the Wasatch Front: validation scenarios

    Morgan Moschetti (US Geological Survey)

    Field of Science: Earth Sciences

  375. Simulations of AGN Jets in Galaxy Clusters

    Brian Morsony (University of Wisconsin-Madison)

    Field of Science: Astronomical Sciences

  376. Simularions of the plasma-material interface

    Predrag Krstic (ORNL)

    Field of Science: Physics

  377. Direct Numerical Simulation of Electrohydrodynamic Atomization

    Vincent LeChenadec (Stanford University)

    Field of Science: Chemical, Thermal Systems

  378. Campus Champions program for the University of Kentucky

    Qiyou Jiang (University of Kentucky)

    Field of Science: Computer and Computation Research

  379. Performance Analysis and Tuning for PTCLM Climate Modeling

    Haihang You (University of Tennessee)

    Field of Science: Computer and Computation Research

  380. Applications of Bis-peptide nanostructures

    Christian Schafmeister (Temple University)

    Field of Science: Chemistry

  381. DIRECT NUMERICAL SIMULATION OF SPATIALLY DEVELOPING TURBULENT BOUNDARY LAYERS ON NSF TERAGRID SUPERCOMPUTERS

    Antonino Ferrante (University of Washington)

    Field of Science: Chemical, Thermal Systems

  382. Molecular Dynamics Simulation Studies of Recognition and Repair of DNA damage

    Arthi Jayaraman (University of Colorado)

    Field of Science: Molecular Biosciences

  383. Campus Champion Program for The University of Texas at El Paso

    Rodrigo Romero (University of Texas at El Paso)

    Field of Science: Mathematical Sciences

  384. Numerical Simulation of 2D and 3D Turbulent Convection at Finite and Infinite Prandtl Numbers

    Hans Johnston (University of Massachusetts, Amherst)

    Field of Science: Computer and Computation Research

  385. Atomistic Modeling of Hydrogen Storage in Nanostructured Carbons

    James Morris (Oak Ridge National Laboratory; University of Tennessee)

    Field of Science: Materials Research

  386. Novel Ferritin Nanoparticles: Classical Molecular Dynamics Simulations of Ion Transport into the Ferritin Core

    Deborah Evans (University of New Mexico)

    Field of Science: Chemistry

  387. Computational Studies of Complex Biological Systems

    Preston Benoni Moore (University of the Sciences in Philadelphia)

    Field of Science: Computer and Computation Research

  388. Physical Models for Active and Passive Microwave Remote Sensing of Snow in Greenland Ice Sheets

    Leung Tsang (University of Washington)

    Field of Science: Earth Sciences

  389. First-Principles Investigation of Elastic Constants of Sn-based Intermetallics and Thermodynamics of Fe-based Multicomponent Alloys

    Gautam Ghosh (Northwestern University)

    Field of Science: Materials Research

  390. Domain-Ligand Binding Free Energy Calculations on PDC109, a two-Domain Protein

    Hyung Joon Kim (Carnegie Mellon University)

    Field of Science: Molecular Biosciences

  391. ultracold molecular photoassociation dynamics of lithium-yetterbium atoms; and three-body recombination in magnetized cold plasmas

    Hossein Sadeghpour (Smithsonian, Astrophys Obs)

    Field of Science: Physics

  392. Molecular Dynamics of Carbon Nanotube Growth

    Boris Yakobson (Rice University)

    Field of Science: Materials Research

  393. Unsteady Simulations of Round Jet Microjet Combination for Noise Suppression

    Luc Mongeau (Purdue University)

    Field of Science: Chemical, Thermal Systems

  394. Simulations of Sequence-Specific DNA-Binding Proteins

    Arjan van der Vaart (University of South Florida)

    Field of Science: Molecular Biosciences

  395. Simulations of Biomolecular Systems and Proton Solvation and Transports

    Gregory A. Voth (University of Chicago)

    Field of Science: Chemistry

  396. DNS of spatially developing turbulent boundary layers

    Antonino Ferrante (University of Washington)

    Field of Science: Chemical, Thermal Systems

  397. Accelerating Nano-scale Transistor Innovation through Petascale Simulation

    Gerhard Klimeck (Purdue University)

    Field of Science: Electrical and Communication Systems

  398. Computational approach to complex and diverse biological systems

    Guillermina Estiu (University of Notre Dame)

    Field of Science: Chemistry

  399. Astrophysical and Cosmological Structure Formation

    Michael Norman (University of California-San Diego)

    Field of Science: Astronomical Sciences

  400. Hadron Scattering from Lattice QCD

    Konstantinos Orginos (College of William and Mary)

    Field of Science: Physics

  401. Molecular Dynamics Simulations of the 20S Proteasome

    Sue Travis (University of Iowa)

    Field of Science: Molecular Biosciences

  402. A Web Interface for Scoring in Computational Drug Design (Renewal)

    Samy Meroueh (Indiana University)

    Field of Science: Molecular Biosciences

  403. Nautilus Group

    Sean Ahern (University of Tennessee)

    Field of Science: Cross-Disciplinary Activities

  404. Campus Champion for Mississippi State University

    Trey Breckenridge (Mississippi State University)

    Field of Science: Advanced Scientific Computing

  405. Evolution of the Intergalactic Medium

    Renyue Cen (Princeton University)

    Field of Science: Astronomical Sciences

  406. Campus Champions program for University of Arkansas

    David Chaffin (University of Arkansas)

    Field of Science: Advanced Scientific Computing

  407. Campus Champions program for Tulane University

    Hideki Fujioka (Tulane University)

    Field of Science: Training

  408. Campus Champions program for Earlham College

    Charles Peck (Earlham College)

    Field of Science: Cross-Disciplinary Activities

  409. Numerical Relativity - Analytical Relativity Project Preparation

    Bernard Kelly (NASA Goddard Space Flight Center)

    Field of Science: Physics

  410. Parallel Simulations of Blood Flow

    George Karniadakis (Brown University)

    Field of Science: Chemical, Thermal Systems

  411. Nonlinear aeroelastic effects for large deformation structures

    Paul Cizmas (Texas A&M University)

    Field of Science: Advanced Scientific Computing

  412. Progress Towards a Comprehensive Theory of Star Formation From Brown Dwarfs to High Mass Stars and on to Giant Molecular Clouds

    Richard I. Klein (University of California-Berkeley)

    Field of Science: Astronomical Sciences

  413. SHORT-TERM CLIMATE SIMULATIONS USING THE CCSM

    Peter Gent (National Center for Atmospheric Research)

    Field of Science: Atmospheric Sciences

  414. Direct numerical simulations of fluidized bed reactors using a Lagrangian-Eulerian approach

    Perrine Pepiot (National Renewable Energy Laboratory)

    Field of Science: Advanced Scientific Computing

  415. Massively Parallel PIC simulations of Ionospheric Gradient Driven Plasma Irregularities

    Yann Tambouret (Boston University)

    Field of Science: Atmospheric Sciences

  416. New Scoring, Assembly and Evaluation Techniques for Protein Structure

    Dong Xu (University of Missouri)

    Field of Science: Computer and Computation Research

  417. Campus Champion Program

    Arun Datta (National University)

    Field of Science: Computer and Computation Research

  418. NWChem on TeraGrid: QA, Testing, Tuning, and Benchmarking

    Wibe De Jong (Pacific Northwest National Laboratory)

    Field of Science: Chemistry

  419. Computational studies of iso-polyhalomethanes

    Scott Reid (Marquette University)

    Field of Science: Chemistry

  420. Predicting Kinetics Using Quantum Chemistry

    Linda Broadbelt (Northwestern University)

    Field of Science: Chemical, Thermal Systems

  421. Statistical Analysis via Filtering for Ultra-High Frequency Data

    Yong Zeng (University of Missouri, Kansas City)

    Field of Science: Mathematical Sciences

  422. Computational Advanced Materials Endstation

    Jacek Jakowski (University of Tennessee, Knoxville)

    Field of Science: Materials Research

  423. Computational Study of Earth and Planetary Materials

    Ronald E. Cohen (Carnegie Institution of Washington)

    Field of Science: Earth Sciences

  424. Campus Champion for West Virginia State University

    Joseph Domaschko (West Virginia State University)

    Field of Science: Information, Robotics, and Intelligent Systems

  425. Comparison of molecular dynamics and 2D-IR spectroscopy for HIV-RT ligand binding.

    Michael Shirts (University of Virginia)

    Field of Science: Molecular Biosciences

  426. Simulations of Nuclear Pore Transport

    Ajay Gopinathan (University of California, Merced)

    Field of Science: Molecular Biosciences

  427. Phonon Localization in Nanocomposite Materials

    Bruce White (SUNY at Binghamton)

    Field of Science: Physics

  428. Evolutionary bet-hedging and phenotypic plasticity in complex environments: the role of epigenetic architecture, host-parasite interactions, and niche construction

    Marcus Feldman (Stanford University)

    Field of Science: Environmental Biology

  429. Campus Champions Program for Mississippi State University

    Roger Smith (Mississippi State University)

    Field of Science: Advanced Scientific Computing

  430. Reduced-order models for control of fluids

    Clarence Rowley (Princeton University)

    Field of Science: Chemical, Thermal Systems

  431. Computing the Thermodynamic Forces of Decomposing a Cellulose Microfibril

    Jhih-Wei Chu (University of California-Berkeley)

    Field of Science: Molecular Biosciences

  432. The sodium/galactose symporter crystal structure is a dynamic, not so occluded state.

    Ivet Bahar (University of Pittsburgh)

    Field of Science: Molecular Biosciences

  433. Fluorescent Proteins/Science Leaders

    Marc Zimmer (Connecticut College)

    Field of Science: Molecular Biosciences

  434. Incorporation of pH Effects In Biochemical Simulation

    Jason Swails (University of Florida)

    Field of Science: Molecular Biosciences

  435. COMPUTATIONAL STUDY OF SOOT FORMATION PROCESS IN COMBUSTION ENVIRONMENTS

    Hairong Tao (University of Michigan)

    Field of Science: Chemistry

  436. Calculations of Atomic level stresses in disordered materilas

    Madhusudan Ojha (University of Tennessee)

    Field of Science: Physics

  437. Computational Science Modules & Education

    Angela Shiflet (Wofford College)

    Field of Science: Computer and Computation Research

  438. computational studies on protein-ligand interactions

    Xiaoqin Huang (University of Kentucky)

    Field of Science: Chemistry

  439. Prediction of weak magnetic exchange constant in Mn12(mda) complex using DFT+U.

    Shruba Gangopadhyay (University of Central Florida)

    Field of Science: Chemistry

  440. Examining the effect of self guided langevin dynamics on the thermodynamic stability and kinetics of peptide folding

    Amber Carr (SUNY at Stony Brook)

    Field of Science: Chemistry

  441. Science Gateway for Arroyo AO code

    Roy Williams (California Institute of Technology)

    Field of Science: Astronomical Sciences

  442. First Principles Based Modeling of Proton Diffusion in Decorated Carbon Nanotubes as Structurally Defined Systems for Proton Exchange Membranes

    Stephen Paddison (University of Tennessee, Knoxville)

    Field of Science: Chemistry

  443. Interaction of Ethene with Single Wall Carbon Nanotubes

    Daniel Lawson (University of Michigan, Dearborn)

    Field of Science: Chemistry

  444. Campus Champions program for the SIUC Computing Community

    Tonny Oyana (Southern Illinois University, Carbondale)

    Field of Science: Advanced Scientific Computing